Middle Bioinformatics Data Analyst (to Yerevan)

About BostonGene

Since our inception in Boston in 2015, we've led the charge in oncology personal healthcare, offering an extensive array of diagnostic tools that empower clinical decisions and advance patient care. Our culture is our foundation—fueled by innovation, a commitment to transformation, and a team of authentic, driven individuals worldwide. At BostonGene, you'll find a community that's not just about the work but about making a difference, together. Join us to be a part of a future where your work contributes to transformative cancer treatments and shapes the lives of patients globally.

Position Summary

Our team is looking for bioinformatics and data analysis specialists with a deep understanding of biology to work with sequencing data (RNA-seq, NGS, WES) at the company's Armenian office.

Job responsibilities

• Independently analyze next-generation sequencing data (whole-exome and whole-genome sequencing, RNA-seq, etc.) within personalized medicine projects.

• Develop and optimize bioinformatics pipelines for NGS data processing (using Snakemake or similar workflow systems), automate ETL processes from raw data to biologically meaningful results.

• Interpret analysis results: identify somatic mutations, differentially expressed genes, copy number variations, and other molecular features of tumor samples; collaborate with biologists and clinical specialists for biological evaluation of detected patterns.

• Review and synthesize scientific literature in oncology and molecular biology to implement new methods and maintain up-to-date analytical approaches.

• Participate in the preparation of scientific reports, presentations, and (when possible) publications based on project results.

Required qualifications

• Master's degree in bioinformatics, biology, computational biology, or a related field.

• 2–3+ years of experience in bioinformatics or data analysis; confident in independently managing data analysis projects.

• Excellent Python programming skills, experience with scientific computation and data analysis libraries (NumPy/Pandas, SciPy, etc.).

• Experience developing or using workflows for biological data processing (Snakemake, Nextflow, etc.); understanding orchestration principles and reproducibility of analyses.

• Confident working in Linux environments, Bash scripting skills, and experience using Git for code version control.

• Deep understanding of molecular biology and genetics fundamentals; knowledge of immunology and oncology sufficient for discussing biological hypotheses within projects.

• English proficiency at B2 level or higher for fluent reading of specialized literature and communication within an international team.

Optional Skills:

• Practical experience analyzing various sequencing data types: e.g., single-cell RNA-seq, gene panels, TCR/BCR sequencing, or metagenomic data.

• Experience with histological data or biomedical imaging.

• Knowledge of statistical data processing and biostatistics; experience with R (Bioconductor packages for genomic analysis) or SQL for data extraction and aggregation.

• Experience with cloud platforms or HPC clusters for storing and processing large data volumes (AWS, GCP, Azure; Sun Grid Engine or Slurm on clusters).

• Data visualization and report preparation skills (Matplotlib/Seaborn/Plotly, R ggplot2, or BI tools) for effective communication of results.

• Experience collaborating with interdisciplinary teams (biologists, physicians, software developers) in genomics or biomedical research projects.

Would Be a Plus:

• Knowledge and experience applying machine learning and deep learning methods for biomedical data analysis (e.g., sample classification by molecular profiles, clustering, clinical outcome prediction).

• Experience with containerization and deployment of computational tasks (Docker, Kubernetes) for scalable data processing; DevOps and Linux system administration skills.

• Scientific publications in bioinformatics, genomics, or related fields; participation in conferences, hackathons, or professional communities.

• Degree from a leading university or possession of an advanced academic degree (PhD) in the relevant specialty.

• Leadership qualities: experience mentoring junior specialists or coordinating small projects is considered an advantage.

Why Join Us?

Join our team at BostonGene, where your work makes a real difference! As a pioneering biotech company with a global footprint, we're passionate about improving lives through groundbreaking oncology personal healthcare. With a team of over 500 dedicated professionals, we foster an empowering environment where your unique skills contribute to a healthier, better world. At BostonGene, you're not just choosing a career; you're stepping into a role that leverages your talents to create a positive change. Discover a workplace that values you as its most precious asset, offering a competitive benefits package designed to enhance your life and those around you.

We offer:

• Full-time position with a permanent contract and flexible working hours.

• Careful, structured, and responsible supervision.

• Dynamic professional environment with a diverse team of bioinformaticians, biologists, physicians, and software developers committed to improving oncological healthcare.

• Competitive salary and comprehensive medical insurance.

• Convenient office location in Yerevan, the company provides a relocation package and complete documentation and bureaucracy support on-site (bank accounts, residence permit, school contacts, etc.).

We offer:

• The office is located in Yerevan, the company provides relocation packages for candidates (and their immediate family members) to Armenia.

• Complete documentation and bureaucracy support on-site (bank accounts, residence permit, school contacts, etc.).

• Full-time position, permanent contract, flexible working hours, hybrid work.

• The office is located in Yerevan, within a 1-minute walk from the metro, and on-site snacks.

• Competitive salary.

• Healthcare insurance, corporate plans for English language lessons, and gym.

• Versatile professional environment: bioinformatics, biologists, physicians, and software developers who united to save people’s lives.

Innovative Workspaces and Flexibility:

Our agile approach extends to our work environment, enhancing work-life balance with beautifully designed community spaces and cutting-edge “labs”, especially in our Yerevan office. Whether you're collaborating in person or connecting remotely, innovation and connection are at the core of what we do.